141 lines
5.1 KiB
C++
141 lines
5.1 KiB
C++
|
///////////////////////////////////////////////////////////////////////////////
|
||
|
// weighted_covariance.hpp
|
||
|
//
|
||
|
// Copyright 2006 Daniel Egloff, Olivier Gygi. Distributed under the Boost
|
||
|
// Software License, Version 1.0. (See accompanying file
|
||
|
// LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
|
||
|
|
||
|
#ifndef BOOST_ACCUMULATORS_STATISTICS_WEIGHTED_COVARIANCE_HPP_DE_01_01_2006
|
||
|
#define BOOST_ACCUMULATORS_STATISTICS_WEIGHTED_COVARIANCE_HPP_DE_01_01_2006
|
||
|
|
||
|
#include <vector>
|
||
|
#include <limits>
|
||
|
#include <numeric>
|
||
|
#include <functional>
|
||
|
#include <complex>
|
||
|
#include <boost/mpl/assert.hpp>
|
||
|
#include <boost/mpl/bool.hpp>
|
||
|
#include <boost/range.hpp>
|
||
|
#include <boost/parameter/keyword.hpp>
|
||
|
#include <boost/mpl/placeholders.hpp>
|
||
|
#include <boost/numeric/ublas/io.hpp>
|
||
|
#include <boost/numeric/ublas/matrix.hpp>
|
||
|
#include <boost/type_traits/is_scalar.hpp>
|
||
|
#include <boost/type_traits/is_same.hpp>
|
||
|
#include <boost/accumulators/framework/accumulator_base.hpp>
|
||
|
#include <boost/accumulators/framework/extractor.hpp>
|
||
|
#include <boost/accumulators/numeric/functional.hpp>
|
||
|
#include <boost/accumulators/framework/parameters/sample.hpp>
|
||
|
#include <boost/accumulators/statistics_fwd.hpp>
|
||
|
#include <boost/accumulators/statistics/count.hpp>
|
||
|
#include <boost/accumulators/statistics/covariance.hpp> // for numeric::outer_product() and type traits
|
||
|
#include <boost/accumulators/statistics/weighted_mean.hpp>
|
||
|
|
||
|
namespace boost { namespace accumulators
|
||
|
{
|
||
|
|
||
|
namespace impl
|
||
|
{
|
||
|
///////////////////////////////////////////////////////////////////////////////
|
||
|
// weighted_covariance_impl
|
||
|
//
|
||
|
/**
|
||
|
@brief Weighted Covariance Estimator
|
||
|
|
||
|
An iterative Monte Carlo estimator for the weighted covariance \f$\mathrm{Cov}(X,X')\f$, where \f$X\f$ is a sample
|
||
|
and \f$X'\f$ a variate, is given by:
|
||
|
|
||
|
\f[
|
||
|
\hat{c}_n = \frac{\bar{w}_n-w_n}{\bar{w}_n} \hat{c}_{n-1} + \frac{w_n}{\bar{w}_n-w_n}(X_n - \hat{\mu}_n)(X_n' - \hat{\mu}_n'),
|
||
|
\quad n\ge2,\quad\hat{c}_1 = 0,
|
||
|
\f]
|
||
|
|
||
|
\f$\hat{\mu}_n\f$ and \f$\hat{\mu}_n'\f$ being the weighted means of the samples and variates and
|
||
|
\f$\bar{w}_n\f$ the sum of the \f$n\f$ first weights \f$w_i\f$.
|
||
|
*/
|
||
|
template<typename Sample, typename Weight, typename VariateType, typename VariateTag>
|
||
|
struct weighted_covariance_impl
|
||
|
: accumulator_base
|
||
|
{
|
||
|
typedef typename numeric::functional::multiplies<Weight, typename numeric::functional::fdiv<Sample, std::size_t>::result_type>::result_type weighted_sample_type;
|
||
|
typedef typename numeric::functional::multiplies<Weight, typename numeric::functional::fdiv<VariateType, std::size_t>::result_type>::result_type weighted_variate_type;
|
||
|
// for boost::result_of
|
||
|
typedef typename numeric::functional::outer_product<weighted_sample_type, weighted_variate_type>::result_type result_type;
|
||
|
|
||
|
template<typename Args>
|
||
|
weighted_covariance_impl(Args const &args)
|
||
|
: cov_(
|
||
|
numeric::outer_product(
|
||
|
numeric::fdiv(args[sample | Sample()], (std::size_t)1)
|
||
|
* numeric::one<Weight>::value
|
||
|
, numeric::fdiv(args[parameter::keyword<VariateTag>::get() | VariateType()], (std::size_t)1)
|
||
|
* numeric::one<Weight>::value
|
||
|
)
|
||
|
)
|
||
|
{
|
||
|
}
|
||
|
|
||
|
template<typename Args>
|
||
|
void operator ()(Args const &args)
|
||
|
{
|
||
|
std::size_t cnt = count(args);
|
||
|
|
||
|
if (cnt > 1)
|
||
|
{
|
||
|
extractor<tag::weighted_mean_of_variates<VariateType, VariateTag> > const some_weighted_mean_of_variates = {};
|
||
|
|
||
|
this->cov_ = this->cov_ * (sum_of_weights(args) - args[weight]) / sum_of_weights(args)
|
||
|
+ numeric::outer_product(
|
||
|
some_weighted_mean_of_variates(args) - args[parameter::keyword<VariateTag>::get()]
|
||
|
, weighted_mean(args) - args[sample]
|
||
|
) * args[weight] / (sum_of_weights(args) - args[weight]);
|
||
|
}
|
||
|
}
|
||
|
|
||
|
result_type result(dont_care) const
|
||
|
{
|
||
|
return this->cov_;
|
||
|
}
|
||
|
|
||
|
// make this accumulator serializeable
|
||
|
template<class Archive>
|
||
|
void serialize(Archive & ar, const unsigned int file_version)
|
||
|
{
|
||
|
ar & cov_;
|
||
|
}
|
||
|
|
||
|
private:
|
||
|
result_type cov_;
|
||
|
};
|
||
|
|
||
|
} // namespace impl
|
||
|
|
||
|
///////////////////////////////////////////////////////////////////////////////
|
||
|
// tag::weighted_covariance
|
||
|
//
|
||
|
namespace tag
|
||
|
{
|
||
|
template<typename VariateType, typename VariateTag>
|
||
|
struct weighted_covariance
|
||
|
: depends_on<count, sum_of_weights, weighted_mean, weighted_mean_of_variates<VariateType, VariateTag> >
|
||
|
{
|
||
|
typedef accumulators::impl::weighted_covariance_impl<mpl::_1, mpl::_2, VariateType, VariateTag> impl;
|
||
|
};
|
||
|
}
|
||
|
|
||
|
///////////////////////////////////////////////////////////////////////////////
|
||
|
// extract::weighted_covariance
|
||
|
//
|
||
|
namespace extract
|
||
|
{
|
||
|
extractor<tag::abstract_covariance> const weighted_covariance = {};
|
||
|
|
||
|
BOOST_ACCUMULATORS_IGNORE_GLOBAL(weighted_covariance)
|
||
|
}
|
||
|
|
||
|
using extract::weighted_covariance;
|
||
|
|
||
|
}} // namespace boost::accumulators
|
||
|
|
||
|
#endif
|